Detailed information of aten_s0326.g17.t1 in Acropora tenuis

Genomic Location: sc0000326_pilon:171086...295088
NR annotation: XP_044184553.1, E3 ubiquitin-protein ligase rnf213-alpha-like isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q63HN8E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens OX=9606 GN=RNF213 PE=1 SV=3
A0A0R4I9Y1E3 ubiquitin-protein ligase rnf213-beta OS=Danio rerio OX=7955 GN=rnf213b PE=3 SV=1
A0A0R4IBK5E3 ubiquitin-protein ligase rnf213-alpha OS=Danio rerio OX=7955 GN=rnf213a PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20173ZnF_RZ-typeRZ type zinc finger domainDomainInterproscan
PF07728AAA_5AAA domain (dynein-related subfamily)DomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046439DomainZinc finger, RZ-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR031248FamilyE3 ubiquitin-protein ligase RNF213Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011704DomainATPase, dynein-related, AAA domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22605UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22754RNF213; E3 ubiquitin-protein ligase RNF213EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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