Detailed information of aten_s0479.g3.t1 in Acropora tenuis

Genomic Location: sc0000479_pilon:50790...71275
NR annotation: XP_015762902.1, PREDICTED: sacsin-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2VDL8Protein transport protein Sec23A OS=Bos taurus OX=9913 GN=SEC23A PE=2 SV=1
Q15436Protein transport protein Sec23A OS=Homo sapiens OX=9606 GN=SEC23A PE=1 SV=2
Q5R9P3Protein transport protein Sec23A OS=Pongo abelii OX=9601 GN=SEC23A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04815Sec23_helicalSec23/Sec24 helical domainDomainInterproscan
PF04811Sec23_trunkSec23/Sec24 trunk domainDomainInterproscan
PF08033Sec23_BSSec23/Sec24 beta-sandwich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR006900DomainSec23/Sec24, helical domainInterproscan
IPR037364FamilyProtein transport protein Sec23Interproscan
IPR036175Homologous_superfamilySec23/Sec24 helical domain superfamilyInterproscan
IPR006896DomainSec23/Sec24, trunk domainInterproscan
IPR012990DomainSec23/Sec24 beta-sandwichInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11141PROTEIN TRANSPORT PROTEIN SEC23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

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