Detailed information of ayon_s0001.g183.t1 in Acropora yongei

Genomic Location: sc0000001_pilon:4320356...4324240
NR annotation: XP_029192989.2, SWI/SNF complex subunit SMARCC2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PDG5SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2
Q8TAQ2SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1
P97496SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF16498SWIRM-assoc_3SWIRM-associated domain at the C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017884DomainSANT domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR032448DomainSMARCC, SWIRM-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12802SWI/SNF COMPLEX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

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