Detailed information of ayon_s0005.g195.t1 in Acropora yongei

Genomic Location: sc0000005_pilon:3025665...3053350
NR annotation: XP_015760844.1, PREDICTED: cadherin-23-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q6V1P9Protocadherin-23 OS=Homo sapiens OX=9606 GN=DCHS2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17803Cadherin_4Bacterial cadherin-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR040853DomainRapA2, cadherin-like domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

TOP