Detailed information of ayon_s0005.g247.t1 in Acropora yongei

Genomic Location: sc0000005_pilon:4340942...4365124
NR annotation: XP_029186063.2, survival motor neuron protein-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8HYB8Survival of motor neuron protein OS=Felis catus OX=9685 GN=SMN1 PE=2 SV=1
O18870Survival motor neuron protein OS=Bos taurus OX=9913 GN=SMN1 PE=2 SV=2
P97801Survival motor neuron protein OS=Mus musculus OX=10090 GN=Smn1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20635SMN_YG-boxSurvival Motor Neuron, YG-boxDomainInterproscan
PF20636SMN_G2-BDSurvival Motor Neuron, Gemin2-binding domainDomainInterproscan
PF06003SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040424FamilySMN complex subunit Smn1Interproscan
IPR047298DomainSurvival motor neuron protein, Tudor domain, eumetazoaInterproscan
IPR002999DomainTudor domainInterproscan
IPR010304DomainSurvival motor neuron, Tudor domainInterproscan
IPR047313DomainSurvival motor neuron protein, C-terminal oligomerization domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR39267SURVIVAL MOTOR NEURON-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13129SMN; survival motor neuron protein-Spliceosomeko03041deepkoala

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