Gene detail

Detailed information of ayon_s0011.g98.t1 in Acropora yongei

Genomic Location: sc0000011_pilon:1560423...1588371
NR annotation: XP_029186361.2, uncharacterized protein LOC114954056 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ayon_s0011.g98.t1

GGAAGAGAAACAATGGCAAAGAAACAGGCGTTTGTAGGGAGGGGCAAGCCCAAAAACAGCTGCGaagaaggctagcgtttgtggggagggacgagcctaaaaacggctgcggaggatacGGCCAAAGGTCTATGCAAGATGGAAGGTCGAGATCAGGTATTTTCTAAACAAAAAGAGATGCAATCTGAACGAGAAGGAGGAATAATTGTAAAAACTCCGATTGAGCAAGACACAGTGAGTGTGCCAGATTCAGGACAAACAACAATTTCTGTGGATGTTTCAGCATCTCAAGGGGTAATAACCAACCTCAAGGGATCTGATGAAGAGCCAGGACAAGCGACAACTTCTGTGGACCCTTCAGCATCTGAAGATGAAACTGGCATCAAGAAATCTGTTCAGGAGACCAGAGCACCAGGGCCAGCATTGCCACACAACAGCTTGCCACAACATTTTGAAAAAGACATTTCTATAGACACACAACACAGCTGTGTCATAGGATATAAAATGAGGTCGGCTTCTCACGATCACACTGAGTCAAACTTTGTAAGGGACGACGAGGAAGTCACCATGAGGACTCCAGAGCAAGAACAACTGACAGTTCCCAAGACGCCATTTAGCACGTTGTCCGAATACACCCCCTCTGGGTTCTCACAAGCGTCTGATGTTTCTTTTACGATGACAAACCCTGCGGCCGACGACCAGGCAGATACAACAAAAGACAAGCTCAATTCATTTCTTGCTTCAAGGGATATAAGCCCGATACGCTCAACAATGGTAATGCCTTGGGACACTGTAGTGATTAAAGACACGTGCCATCCCAAACAGCCATTTAGTGCTATTAGGGTACGCAAGAGTTCTACTAAAGAAAGCAGCGCCACTGTACTGCCAGATCCTGACTACGAAGACAGCGATGCAGAACAGCATGGCAGCACTGCAGATGCTTATTATATACTGGGCGACCATCATAAAGCCATCGATATCTTCGAAAAAGAAACGTTGCCCATTTACCAAAGTCAACTGGGCGAACACCCCTGGACTGCCACCACTCTGCACTTGATAGCTATCTCGTACACGGCTCAAGCGCAGAGAAACGTTGAGGGCGCTGTAAAGAACAGCAGAGACGCCCTTGAACTGCGAAAGAAGTTGTTGGGTTTTCATCAGGAGACTGCACGGTCACATGTCTTACTCAGCGACGCGTTGGAGCTTCAAAACGATTTCGAGTCAGCTTTAAAGGAGCTTGAAGAGGCCTTGAAAATTCAAAAAGAAGTGTTGGGTGAAAACCATAGCAGCACAAGAGATACACAAGCAAAGATGATGAGGATCGCAAGCATGCAGGATTCCAACTGATGTACGTATGAAAGGCGCAAACTGATACGAAATTAGAATTTCCACTTTTTACTAAATTCATAAAACCGCATTTAATCATGACCTTTAATTTTGTCATTACAGTCGTAATGACAAAGAGAaaggcgtttggccttgataaaattagtgcgcatctcttaagattcagtggaagttattactcctttaacaaatttacagataaatatcgttaactatttacatgaatgtgaacttcaataaaatgcttgaaacgctaatttttcaacggtcttatgcacagtatttatatcaaatacacatcccataaccataaacaggttatgaaaagctggggcagctctagtgaacactatttctagttTAATTCATAATAATAATGGTGAAGTTGTGGTCAATTTATTCTTCACTAAGTCAATTAATCTTGAGCAAGGCATTTAGTTTAGAAGTTCTTTCAGCGTCGTGTAAATATTTAAcaatagggagcttacgcacccacgacgacgaaggcataaagaatgtaataaactgactgaatttgcatatttgaccatcaaaaacattagttttgcaggctttgcacgtgcgtttttcatcttttgacatttcgtagacgttctcgttctttccacgacgtgaaatcacctgttttgcagttgtgtgatggtcgtgagcatatgctgacaaatgttcaatattatcttcttatctctgaagcgctggtcccaattgaatttcaggaatgttaaaacacattttgaaagcatagtgactttgaataattgagaaacgattacagaaacgcgaagttacattttcagatgacgttctcgttaccgtcgacgtcgtgtttgcgtaaactcactaATATATACagcccgaatgtgctctgagtcaatagcccatgaggccgaaatatcgagacaaaacatctttccttagttaaagcta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04944	KCNN3, KCA2.3; potassium intermediate/small conductance calcium-activated channel subfamily N member 3	-	Ion channels	ko04040	deepkoala