Gene detail

Detailed information of ayon_s0015.g160.t1 in Acropora yongei

Genomic Location: sc0000015_pilon:2704441...2713152
NR annotation: XP_029186600.2, doublecortin domain-containing protein 2C-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ayon_s0015.g160.t1

CGTGACAGAAAAAAATAAGATGTGCTTCAATAAATAATAGCAAGACTGACTTGAGTTGCTGATTTTCTCAACAGTTTCTTTGGCTCCTGCCGGAAATCAATGAATAATCGACGAACGCTTCGAGCGGTCTTCTTTGTCATCGCACTCGCCTTCGTATTGTTTATCAAAGTTCAGGTTGAATTGAAGAAAATCAAAAGCATGGAACCTTTGCAAGAACCCAGAGGGACATTAGTTACATCTAAACCCAGATTATTCTCGTTGCAAGATGTTTCTCAACATTCTGATGGAAATTCTTGCTGGATTGTGATCGATGATGGAGTATACGACGTAACCAACTTTTTGGCGGAGCACCCAGGTGGTAGTGAGATCATGCTCGAGCATGCTGGTATGGATGCCACTTCTGTGTTCCAAGATATCAATCACTCAACTGAAGCAAAGAAAATGCTCGTTGGATACTACATTGGTGAGCTGATAGAGAGGGACAGGATTCACAAGAAAAAGCCCAGGTCTTGAAGATCAGAGGAAGCAGTATGACTGCGATGGTATCGTCTGTACCCCCAACAGCATTGACTGTAAAGGTTTACAAGAATGGTAACACCACATTTCTGGGTAAAACTCTCGTTATCAACAGACGTTGTACAAGGACGATGGAAGCATTGTATGATCAGATAACAGCTCACATTTCGGCGTATAATGCCGTAAGAAGAATTTGTACACCGATTGGGGGTCGGCCGGTGGCGAATCTTGAGAGTATAAAAGACAAAAGCGTGTATGTTGCTGCAGGGAGAGAAGAGTTTAAAAAACTGAATTACGCTGATATAGGAGCATCAAAACAGCGTCGAGCTCGTAAAACTAATAATGCGCCTAGAAAAACTATCATTGTTGGAGAAGGAAGACATAAAATGGATTATGAGTGGGGAAAACGGGATTTGAAAATCCTTTATGTATTTTGCAACGGAGACGTGTTCAAGCCCAAAGTAAAAATAGTTCTTCAGAAGAAATTTCAACAGAGTATGGAACAGATTTTGAGTATTGTGCAAGAACACGTTGCAATGGCGGCTGCAATTGCTGCCCTTTATACCAAAGATGGTAAACTGGTTTTAAGTCCGAGTGAGTTGCTCTCAGGAACAGATTACGTAGCAGTTGAAAGGGGACGAGCGTTTAAACGGATGAACTACGGTGGAGCCAGCTCTCCTCTGTCAAAAGGCTCTAGAGCGCGATTTTTGCCTCACATAGGTAATGGCCAACTAATCAACGCAGTACAGCCTCAGAAGAGAAAGGCGGCGAAACAAAGGCCCAGAATATTAAAAAACAACACCAAGAAAAAGACCCATGAATTGTCTTCTGACGCCATGCAGCAATTTTCACCAGAATTACCGCCAGCTCTCGGTCTGACTCAGCTGCGCGAGTCGCAAGACGCCGAGAGCATCAACAATTTTACGATATCCAGTTCACCTCCTGGATGGATTGGCGAGGACACCCCTCTTCCTGAGGACACTGGGATGGTAAAACAAGGAAACGACGAGGAAAAGACATCAACTGTTGGAAATGTGTTCACCGCGAGCGGGTTGATGAAGGAAAAAGCAGATGAAGTTAGGGAAACTCGCCAAACAAAGGAGGAGAAACCGATTGACCTTACTACGGCAGAAGAAGTTTTTGAGGAAGAACTTCATGGTGTTGAGAAAGAACTGACGAACAAGGGAGacaaacaatcaaaagaacaaacaaGGGAGATGGAAAAAGAGGGATTTAAGGACAAATCCGTCTCAAGACCACCAGGTGAAGGTTCCATCAGAAATGAGACTTCTCCTCGTTCATCTAAGGAAGGACGGCGAAAAAGTTCAGTTTCTAAACAGGACACAACCACCGACGGAGAAAACACCGAAAACAATAGTAATGTTGTGAACTAGTTGATTGCCAACAGAACAAAACCAAACTCGCATGCGTTCATTTTTCTTTCCTCCCTTTTTTCTGTCAAAATTAAAACTCTCTCTTCTCCTTTTCACACCGACCCCTACGCAAAAACCGTCTGTCAAGAACTAACTATCGTTACATAAATGTAGTCATGTAATTTCCGACAGCATAACTCTAAGTTCATGAGGTTACTCAAGTGACTTAGGTTACTCTCTGAAAAAGAGTTAAGAATGTTAAAGCTAACTTAAAGATACATATGCATATACGATGGGGAATGAAATTCTCGCATTTCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03607	DCX	Doublecortin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049626	Family	DCX/DCDC2-like	Interproscan
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR003533	Domain	Doublecortin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23004	DOUBLECORTIN DOMAIN CONTAINING 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23405	DCDC2; doublecortin domain-containing protein 2	-	Cilium and associated proteins	ko03037	deepkoala