Gene detail

Detailed information of ayon_s0032.g71.t1 in Acropora yongei

Genomic Location: sc0000032_pilon:1325853...1341792
NR annotation: XP_029210749.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114974750 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ayon_s0032.g71.t1

TCGCGTTACTGCCTCCATAGACAAGCTGCCGACTTAAACCGTGGACTGGGAGCCTCAGCAACTCAACAGGCTGTGGTACAGAGCTTCTTAAAGAATTATGATCAGGCCATTGAAGTTCTTGAGCGCGCCACTCGCAGCAAACCTGTCGCCCCTCTTTTTGTTCTCCTCGGAAAAACCAACATGAAGGCAAAGAGGTTTGAGGACGCCATTCGAAGCTTTGGTAAAGCTGTTTCTATCATGACCCCTTGGAATTTTCGAATGGAAATGCCAATAGAAGCCGCATCCGTTTATTTCTTAATTGGCATGTGTCACTCTGAGCTCAGCAAACCACTCGATGCTTTATCAGCTTTTAACAATGCCATTCGTGTGAACCCAGATTACGCTGAGGCTTTTTACCAACGAGGCCTCACCAAGATGAAACTGAACCAAGCTAAGGGTATCCATGATTTTAATCGGGCGCTGGCCATCAATCCTTCGTTGTTCCAAGCCTTCCTTAGTCGGGCTGCTTATTATGGTATGAAAGGCCGGTTTAGCAAAGGCATCATGAGCTGCAATGAAGCCATTAAGCTACAGCCTCGCAGTGTTCGAGCTTATCTGTACAGGGGCGCTCTCAAGTACAACATCAAAGCTTATAGTCTCGCCGTCAAAGACTTAACTGAAGCTGTAGCTATTGACTGCAAGTGTTCCCTAGCGTACTTCAACCGAGCTGTCTGTTACCATGAAATGAGGTATTTTCAGAAGGCACTGATGGACTATGGAACAGTCATGTTACTCGAAGAGGAACGTAATCTTAAGGTTTTACAAAATCGAGGATTGCTTTACTATGAAATAGGGGACATCGAAAACGCATTGCAAGACTTTCTGGCCGCGTCTAAGGTGTCACCAGATGATCCGCACATCCGTCATACGTTGGGTCTCTGTTACCACAGGTTAAACCGCTTACAGGAATCAGTCTCGTCATACAATGACGCCCTTCGAATCGATCCTTTCTTCGTAGAAGCATTCAATGGACGCGGAAATGCACTAATGGACTTTGGACACGAAGATGGCACTGTGCTAGGACGGCGTGATTACCTAAAAGCTCTTCACTTGGATCCACTGTGTTTATCTGCACGAGTCAACTTGGGATATAACTTGCAGGTTGAAGGAAGATTCCAAGCTGCGTGGAACCTGTTTTCTTCAGCAATTTCTATCGATTCAGGATGTCAGTCTGCTCTCGAAGGGCGCGCAGTCGTCAACTTACAGATGAGCAACACCTTTGGTGCGTTTGTGGATATGAATGAGGCTATCAAGATTTCAAAGACTGCGGAGTTGTTGACTAATCGCGGAGTCGTTCAACAGTTCATGGGTGACTTTGTAAATGCCATTCGTGACTATCAGGCAGCTGTCAAGATCGACCCATCATATGCACTGGCTTACTACAATGCAGCTAATGTGTATTTTAGACAGCGCCAGTTCAAACAGGCGTTAAATTATTTCAACAAGGCATTGTCTTGGTACGCGGACGATGAATCAGCTGTACTCAACCGCGCCATTACCAAGGTCATGCTGAAGGATACTAAGGGCGCTATTCGGGATTTCAATCGAGCTGTTGAACTGAACCCGTACGCAGCCCACGTTTATTTTAACCGTGCAAATCTTTACGCGTCACTGAGGAAATACAAAGAATCTGAAGATGATTATACACGAGCTTTGAGTCTCAAACCTGGAGATGCTCTTGTTTACAAGCGTCGAGCGGATGTTCTTGGTAAGCTGAGCAAGAAGGAGGCGGCGATTCAAGACTATAAGCGAGCTATAGTCATTCAGACCAGAAGGCATTGATACTGACGTCAGTATGTGTTCAATCCATTCCCGGCAACTTCTTGTTTTTGAAAAAAAGCACTTAAGCTATAATTCCTCACGTCATTTCGCGAAAACAAGAAAACGACAGCAGTTTGCAGCCGATAGACGCAGATATTAATGTACATCGGCAATACGTTCATGCAACATGTACGGGTAATTCCCTCAGGGTGTATTGACAAGTAGGGTTTGTAATGTGTCCACCTGGCTAGTCTAGTTTTGTGTTACAATTGGGTAACATCGGTGACAAGGTTTGTTTTTGCCCCATTTTACGAGCGCTGACAAATGCACAACTTGGATGAGGTATTTATTGTATACATATGCATTTTTAGCAATAAAAACAACAGCTCAAT

Protein

Uniprot

Uniprot term	Description
Q86TZ1	Tetratricopeptide repeat protein 6 OS=Homo sapiens OX=9606 GN=TTC6 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13414	TPR_11	TPR repeat	Repeat	Interproscan
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR050498	Family	Photosystem I assembly protein Ycf3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44858	TETRATRICOPEPTIDE REPEAT PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan