Detailed information of ayon_s0037.g1.t1 in Acropora yongei

Genomic Location: sc0000037_pilon:5796...57100
NR annotation: XP_015773581.1, PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A3KN83Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 GN=SBNO1 PE=1 SV=1
Q689Z5Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2
Q5BJL5Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13871Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan
PF12012DUF3504Domain of unknown function (DUF3504)FamilyInterproscan
PF13872AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026937DomainStrawberry notch, helicase C domainInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR026741FamilyProtein strawberry notchInterproscan
IPR021893DomainDomain of unknown function DUF3504Interproscan
IPR039187DomainStrawberry notch, AAA domainInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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