Gene detail

Detailed information of ayon_s0049.g111.t1 in Acropora yongei

Genomic Location: sc0000049_pilon:1589355...1599710
NR annotation: XP_015751372.1, PREDICTED: zinc transporter ZIP9-like isoform X3 [Acropora digitifera]
Species abbreviation AYONG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ayon_s0049.g111.t1

TGGTTGCTTAGCCCGAGGACGCGTGTAAATGGAAATTTTTCTGAAAAGGAACGAGAATTGAATTCATGGCCTTTGCGAACGATCAGAGACAATTCGAACACTTCTTTGTCTCCTCCTGTTGAAAAAAAAGATAAGAAGGAAACAAAATGGACGATGTGACTAGGTTGTTTGGTTTAAGTTTCTGTATGCTACTGGGATGTTATGTCGCCGGCGCTATTCCATTGGCATTCACTATGTCCGAGAAGCGGTTGAGAATGATCAGTACACTGGGTGCTGGTCTTCTAGTCGGAACGGCTCTTGCCGTAATAATTCCAGAAGGTGTGCATGCGTTGTATGAGTCAGAGGATCATGACCATGGTTCTCACATCCATAAATCGCCTGATGCTGGAGAGAAATCACATGCACAATCTGATTCCTCCGAGGAGCACTTAAATATTGGAATTCTAAAACACCACGTCTCAAAAGTTGAACCTGATGTATTTATTGGTCTTTCGTTATGCTGTGGTTTTGTCTTCATGTTGTTGATTGATCACATCAGTGGCGGCCATTCTCATGGACCTTCTGGAACAGATCCAGAAAGTAATGGAAAGCAAAGACACAGTAAAATAACAGCTACTGTTGGCCTGGTCGTCCATGCAGCAGCTGATGGTGTTGCACTAGGAGCCGCTGTATCTACTTCAAAAACAGATGTGGAAGTGATTGTGTTTGTAGCAATTATGCTGCACAAGGCTCCTGCTGCCTTTGGCCTATCAACTTTTCTTCTTCACGAAGGACTGGTTAGAAATAGAATACGGAAGCATCTCTTAGTGTTTGCTGCAGCAGCCCCAATTATGGCTTTGGTGACTTACTTTGGCCTTAGTCAGAGCAGTAAAGAGGTACTATCAAGTGTAAAGGGCACTGGTATAGCCATGTTGTTTTCAGCTGGGACTTTTCTCTACGTGGCAACAGTGCATGTGCTGCCAGAACTTACGAGCATGGGTTCACAATGTGAAAGTGGAACAGAGCAAGGTCTACAAAGGACTGAGTTATTTCTCATGGTCTTTGGAATAGTATCACCTCTACTACTTTCCCAAACACATAATCATGGTCATTGATGCATTATTTATTGCTCGTCGTGGAAGCTTGGAAAAAAAATATGAGCATCTCACGTTTGTCATTCCTTCCCCTGCTTTGTCTGCATCGTATGCAGTGCCAATTTAATTTACCATTAGTCTTAAAATGCCTGCAACTTCTAAGATTGGAGGCCTCAGAATACTATAGTTAGGTGCTAGTGTTGCCAAAAGGAATGACAATCCAAAATCCATGTACACCCAACACTGTCCAGGGTTTGGGTTTAGGACCAATAATTCTCATTTTACCAGAGGTTAATGATAGTACACCTGAAGAGATGTTAGACAAGAAAATATCCCAATAATCACAGCTGTAGAAAGAGGTTTTAAATTTGTCAAGTGTATGTATGTATTTATTAGACGCTGTAGAAGTCTAATGAGCAAGGTCTTTTCATGAGCCATATTTTTCTTGTTCAAGGAAAATGATATTAATTATTTTTATTACTATAGAATGAAAAATTGCAGAATGCTTCTCAGGGGCTAGGTAACTGTCGTGACCTAGAATTTCAACAGGAATTTTTTCTGCTTTTGCTGGTCATGTTATGTCATGTGCAGGCAACCATTGGAGGTCAATTCAATTTTCAGTGTTAATATTATGACATTATTAATACTCTCTAAGTAGCATATATAGAAACCTTCCATAGGGAGTGAATGGTATTAAAATGGGTCCTGAATGTCGCGTCAAAACACTTGCCTCAATTTGTGAAAATAGCCCAGggagagtactctaatatggaacagacggggatgctcgtcggaaattttgaatttaacccctaaaggagaccatctgggcatggctcacgctttttgtgacccctaaaggagaccaatatgggcgtgccttaagcaaagtttgacccctaaaagagactgctaaaaaagaaagaaaagaagaaaaaagaaaattcgacttctctttctcttcgcataattctgtgtttcttcgcagaaccctaaatgagaccttggcagcttaaaatattggcacttttcctggaacaccctaagcgagaccaaaatccattatttatacctctaagcgagacgacgagcatccccgtctgtttcTGATTACATTGTCATGTTTCATGAACAAATACTCCTGCTTAGTGTCTGTTCAAAGACACTAGACAGGAGTTTATAATTATACCAGTTTATGTATGCAATATGTCCGAGCATTAAATAATTTGTCAAGGGTTCCATTTAGGAAAATTACTGAATAATATTACTGGCAAGTTATATGAATCCTGGATGAGGGATAACTTTTTATAACTAACTTAAGGTTTAGTCATGTTATGTAAGAATTTTGCGTTGCAAGGAATATATATGGAAAGGCAATGATTGTTTTTGAAAAAGGCAGCTACCAAAATTTGATGTAACGGTATGGAAGAataataattcttattatattattattatgttattaATGTGCATCAAATTGAAATAAAACCCTAGGATTCAAGGCTATTATTGTATAGGGGGAAATATGCAAATTATCTTGATTTTACCATCATTCTTGTCTGTTGTTAGTTTATTGATAGCTTAATGATTATCTTAGACCACCTTCATAAATGTCTGCATATTTGTTATTAGTATTTACCAAATCAGTGGATAGCACTTTTCGCGCGTTTTGATTGGCTCCCGTAACTCGGAATATCCTTGGCTATTCACTGTTTTGCGAACGGAAAGAAAATGGCGCATCGTTTCGCGAAAGTTTCAGAAGAAGAAATTAAAACAGGATTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q640S1	Zinc transporter ZIP9 OS=Xenopus tropicalis OX=8364 GN=slc39a9 PE=2 SV=1
A0A3Q7ZPG5	Zinc transporter ZIP9 OS=Micropogonias undulatus OX=29154 GN=slc39a9 PE=1 SV=1
Q6NRM1	Zinc transporter ZIP9-B OS=Xenopus laevis OX=8355 GN=slc39a9-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006011 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02535 all species →	Zip	ZIP Zinc transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003689 all species →	Family	Zinc/iron permease	Interproscan
IPR045891 all species →	Family	Zinc transporter ZIP9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16133 all species →	SOLUTE CARRIER FAMILY 39 ZINC TRANSPORTER , MEMBER 9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030001 all species →	Biological Process	metal ion transport	Interproscan
GO:0046873 all species →	Molecular Function	metal ion transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0006829 all species →	Biological Process	zinc ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14715	SLC39A9, ZIP9; solute carrier family 39 (zinc transporter), member 9	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.