Detailed information of ayon_s0054.g145.t2 in Acropora yongei

Genomic Location: sc0000054_pilon:2109625...2143455
NR annotation: XP_015772999.1, PREDICTED: rho guanine nucleotide exchange factor 5-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5BKC9Ephexin-1 OS=Rattus norvegicus OX=10116 GN=Ngef PE=1 SV=2
Q8CHT1Ephexin-1 OS=Mus musculus OX=10090 GN=Ngef PE=1 SV=1
Q5VV41Rho guanine nucleotide exchange factor 16 OS=Homo sapiens OX=9606 GN=ARHGEF16 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR047270DomainEphexin-like, PH domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR047271FamilyEphexin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12845GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07525NGEF, EPHEXIN, ARHGEF27; neuronal guanine nucleotide exchange factor-Membrane traffickingko04131deepkoala

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