Genomic Location: sc0000059_pilon:2278280...2303819
NR annotation: XP_029197444.1, protein Smaug homolog 2-like isoform X1 [Acropora millepora]
| CDS | |||||
| ayon_s0059.g144.t2 | |||||
| Transcript |
| ayon_s0059.g144.t2 |
| Protein |
| ayon_s0059.g144.t2 |
| Uniprot term | Description |
|---|---|
| Q8CBY1 | Protein Smaug homolog 1 OS=Mus musculus OX=10090 GN=Samd4a PE=1 SV=2 |
| Q9UPU9 | Protein Smaug homolog 1 OS=Homo sapiens OX=9606 GN=SAMD4A PE=1 SV=3 |
| Q95LV5 | Protein Smaug homolog 1 OS=Macaca fascicularis OX=9541 GN=SAMD4A PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050897 | Family | SMAUG/VTS1 RNA-binding | Interproscan |
| IPR037093 | Homologous_superfamily | Smaug, PHAT domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12515 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0017148 | Biological Process | negative regulation of translation | Interproscan |
| GO:0030371 | Molecular Function | translation repressor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K27396 | SMG; protein Smaug | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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