Gene detail

Detailed information of ayon_s0072.g83.t1 in Acropora yongei

Genomic Location: sc0000072_pilon:1275350...1282133
NR annotation: XP_029188143.2, N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like [Acropora millepora]
Species abbreviation AYONG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ayon_s0072.g83.t1

AGCTCTGTCCAAAATTTCCCTGCTCTGAAATAAGTTTGCGTCAGTTCTAAGAACTGGCCAATTTAGCCATCCAGTTCTGAATAATGGTAAATGCCTTTAGTAAGGATTTTGTTCAGTGATAGATGTCTCCTCACAAACACTGTCACAGCTATTGCTGTCAGGTCTGTTGTCCCACAAGCCAAGACTGTGTCGATTGATCTATATAATTTTGCTGATCTGCTGTTGAAGCTTGGATTTGTAAATGCTATCAACCTGGATGGTGGAGGGTCAGCAACAATGGTAATAAACAATACTGTGGTAAATTATCCTTCTGACAAATGTGGAGAATTTTCTTGCCCAAGACCAGTGTCTACAATTATCTGTGCTCATGAGCCTGACTGTATATTGAGGAATTGCAGTGGTCATGGGCGTTGTGTGATGGGACAATGTATCTGTGATGATGGATGGACTGGTGAAGCTTGTGATATTTTGAAGTGCAGGCAGAATAACAACTGTTTTCCGAATGGCATCTGTTCTGATCAAGGAGGCTGTCAATGTTTTCCTGGTTGGGAGGGCAAAAACTGCAGTACAGCTTGTTCTTCAGAGTCATTTGGAGCAAACTGTAGCCAAAAGTGTCTTTGTTTGAATGGTGGAATGTGTGATCCTGAAGATGGACATTGCAGTTGCAAACCGGGGTGGACAGGATCATTTTGTCAACAAGGCTGTTTCCAAGGGACTTATGGAATAAATTGTTCAAGGACTTGTGACTGTCACGACACTTGCACTTGTGATCCACAAACTGGAAAGTGCCTTTCAAGAGATGAAGCAACAATGCTCAGTTCTACAAGAAAATGGTTACAATGTGTATTGGATTCAAGAATGGCAAATGCATCACCAAATTCAGATTTGAAAGAAACCAACACTGAAAAAGTTCTAAGTTTGAAAAAGGAATTTAGTAAGCTGTTTGTCTGGTTTGTGGCAGTTATCAGTTTGTGTGGCATCAGTTTCTTAGCAAATTTATTCCTCATTTACCTGGCATGTAACCAATCCACCAGGGGTACATATTGGACCAGAAGAATTGGGGATGAAAGACAACTGCTTTTTCACGGTGATGACGATGACAACGATGAAAATGCTCTCTGAAATGAGACTGGCTATTCCAGTTCTTTGGTTTGTGAAGATCACATGGATCAACAGATACAAAAGGGTTTTGCCAACATCATTTGTGTGCTAGCACTTAAACTAAGGGCAAAACAAACATAAAGAGACAAAGCTGGTTACTGAGAACAATGCACTGATGAAACTTGGTAGGAGGGTAACCAAGAATGGTCATTGATCAGGAAAACAATGAGTTTGAGCAGTGACTACTGTCTTATGACAACGTTCAATCCACATTGGTATCAATAATTGCTGTTTGTTTAATGGAGGGCATTCACAAGGAAAATCTCACCTTCCTTTACAGTATATCACTTTTACATTCTGGGATTATGAACAGTTTCACATCTACCATCACACCTTTTTGCCTTATATTATCATTCTCATCCATACTTCAATCATCACCCCTCTAGTGCAAGACAAACCAAAATATTATAGGAAGATTTTCCACTCTGATTGGGAATAAGGAAGTATTGCGCTTGATGTTAGAAAATTACAGCAATAAAATGTTATTTGAAAATTGAATTTTTTTTAATTTACTCCACAAATCAATCAATCTCTGCGGCAAATGTTTCACACAGACTTAAGACAGGAAGCACAGGCTTGAAAGTTGCTAACTTACCATAATCAAATAGATCTTAAAAAGATCTTAAAAAGAATTAATCACTGGTAATGCACCTATAAGTGGCCATCCCTGGGGAGGGGTGACCCTGGGGAACCCCCAGGCATTTGCACGACAACATTTTCAAATACCCCCAACCCAAAAGGAAGAATTTTTAACAAAGAGACCCTAACATCCATCCCCTGGGGTTATAGATGTGTGCTCTGCCTAATCAAAAAGTTCATTGTTTTTTACACATTATAAGGTTCAGTTTACCTTGTAAGTTATGAAATGGTAAAGGAGAGAATATCTTTTCCTGATAAAGAAGAACTACCGGTAGGATTTGTTAATATGTTAATGTCTTACATTAACTGGTCAAAATATAATCACAAACAAGTTTTGCAACAATTTTTTTTTTTGCAAGAAGCTAGCACAACAATCAAAAGACAATAATGAAAGCTGTGTTTTCCTGCTCCTTGTTTCATTATAACACAGGATTTTCCATTTTACCCTCATCTGATCTCCAAACAATAGGCTAACGGTAGCCTATATTCCGGCTGGATTTTCATTTCAACTTATACAATCAAGATAACCTCACATTAGTGATCACATCCATCAGCAGTGTTTAAAGAAAACACATAACTTATTGTTATTTAAAGCTGCAAAAAAATGGTACTTATGCAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P68827	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Bos taurus OX=9913 GN=NAGPA PE=1 SV=2
Q8BJ48	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Mus musculus OX=10090 GN=Nagpa PE=1 SV=2
Q9UK23	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Homo sapiens OX=9606 GN=NAGPA PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005519 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan
PF09992 all species →	NAGPA	Phosphodiester glycosidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR042635 all species →	Family	MEGF10/SREC1/2-like	Interproscan
IPR001774 all species →	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR018711 all species →	Domain	Phosphodiester glycosidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24043 all species →	SCAVENGER RECEPTOR CLASS F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005044 all species →	Molecular Function	scavenger receptor activity	Interproscan
GO:0007154 all species →	Biological Process	cell communication	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ayon_s0072.g83.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.