Detailed information of ayon_s0076.g2.t1 in Acropora yongei

Genomic Location: sc0000076_pilon:28876...98317
NR annotation: XP_044165090.1, nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35206Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15a1 PE=1 SV=2
P39059Collagen alpha-1(XV) chain OS=Homo sapiens OX=9606 GN=COL15A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06482EndostatinCollagenase NC10 and EndostatinDomainInterproscan
PF20010Collagen_trimerCollagen trimerization domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010515DomainCollagenase NC10/endostatinInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR045463DomainCollagen type XV/XVIII, trimerization domainInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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