Detailed information of ayon_s0078.g129.t1 in Acropora yongei

Genomic Location: sc0000078_pilon:2225759...2226576
NR annotation: XP_029181173.1, paired mesoderm homeobox protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O15266Short stature homeobox protein OS=Homo sapiens OX=9606 GN=SHOX PE=1 SV=1
O35750Short stature homeobox protein 2 (Fragment) OS=Rattus norvegicus OX=10116 GN=Shox2 PE=2 SV=2
O60902Short stature homeobox protein 2 OS=Homo sapiens OX=9606 GN=SHOX2 PE=1 SV=4
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR052631FamilyPaired homeobox Bicoid subfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46255SHORT STATURE HOMEOBOXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:1990837Molecular Functionsequence-specific double-stranded DNA bindingInterproscan

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