Detailed information of ayon_s0087.g121.t1 in Acropora yongei

Genomic Location: sc0000087_pilon:1066884...1078435
NR annotation: XP_015773621.1, PREDICTED: serine--tRNA ligase, cytoplasmic-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9GMB8Serine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=SARS1 PE=2 SV=3
Q5R9K9Serine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=SARS1 PE=2 SV=3
P13642Serine--tRNA ligase, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=SARS1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01875SARS, serS; seryl-tRNA synthetaseEC:6.1.1.11
Transfer RNA biogenesisko03016deepkoala

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