Gene detail

Detailed information of ayon_s0167.g31.t1 in Acropora yongei

Genomic Location: sc0000167_pilon:435306...442801
NR annotation: XP_029205655.2, LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ayon_s0167.g31.t1

GACTAGGTGCTCTCGTACTTGCGGAATAGGAATCAAACGCAGGGCTGTCGCCTGTTTTTCAATGGTTGCTCGCAAACGACTGCTTGACTCAGCTTGTGACCTCACGCGAAAACCCGCATGGCAAGAAGATTGCAATGACAAGGAATGTTTCCCAGGTGCCACATGGCACAAGGGAGAATGGAGCAAGTGCTCAGTTTACTGTGGAATCGGTGATAAGTCACGTGACATATGGTGCAGCGCCAAAAATGGGAAAAGAATCGAGGACAAATATTGCGCAAGTGAGCGCAAGCCCAAGACCAGGAGATCGTGTAACAAGAAGAGGCGATGTGGAGAATGGGAGGTTGGCTTATGGAGTGAGTGTTCAGTTACGTGTGGAATTGGTACAAGAGACAGAATCGTGAGGTGTCTTCACACGCTTGAATATAGGGAGGCGAAGTTTTGCGATCAAAACGCGCGACCGCCAAATAAGCAGACGTGTAATAAAGGAATCTGTGCAAAGCATTTTGACCTCTACCAATGGCAGGCTTCCCAGTGGACTCAGTGTTCGCGTTCTTGTGGATATGGGAGGAAATCCCGTGACGTTTGGTGTGTCGACTCGTCCAACAAGAAAGTTAATGATACACTCTGTAACCCAATCTCCAAACCAGAAAACAGTTCCGTGTGCCAAGGGTCCATGTGCCCATCTAAGTGGAAGTACGGTGATTGGTCCAGGTGCTCTAGGAGCTGTGGAGTTGGTTTTCAGTTGAGAATAGTCGAGTGCGTCGGAAGTAATAAATGTGATAGACGAATGAAGCCTCCTCACTGGCGTCTGTGCAACATGGGGCACTGCAGAGGGTTTCTTTTCTGGAGAGTTGGTCCCTGGTCTCCGCACTGTTCCGTAAGCTGTGGCCGTGGCATTGTGAGGAGAGCAGTCCAATGTTTGGCGAGAAACGGCACCTTCATGGATGACGTTCACTGCACAACGCCCTCATCAACGAAACCGGACACGTCACGTGTTTGTCAAATGGAACCATGTCCACCGACAACTTGTAAAGACGTCCAGGCGATCAGTGGATCACAATCTGACGGTGAACATACTCTTCTGGTTCAAGGAAAGGAATTACAGGTTTATTGTCACCAAATGATGTCAAACAAGCCTACAGAGTATATCACCCTGAAAGCAGGTCCTATGGAGAACTTTGCGGAAATTTATCCCAAGAGATTGCGTAACGCGTGGGAATGTCCGGCGAATGGTTCCCACAGTGAAACATGTAGCTGTGAAGATGACGATTATGAACTATCAGGTGGTTCTTACTTTTCAAAAGTCAGATTGGATTTGTCATCCATGAGAATTATTGCGGAAGACAAGACGTTTGCGTTGATGAGAGGCTTACGTCCACCGCCATATGGCACGGCAGGAGATTGCTACAGTGCTCAAGGAAACTGCCCACAGGGTCGTTTTAGTATCAATTTAAAAGAAACTGGCATCAGGTTAACCTCTAAGGTCATGTGGAGATCAGCTGGCCAAGCGTATTCACAAACCATCTACAGATATCCCGGCGGGCTTCAAGTGATAGGCAAATGTGGAGGGCGATGTGGAAAATGTAGCCCTGAATTAGATGGAGGATTACAAACTGAGATAGCTGAAGTTGAAGGCTGAGATTTGGAATTCGTGTACCCAGTTTTTCAATAGGTGTAAATATTTTTTATCCATAGGCTTTTCAAATTCATGCATCTAGAATACCTATATTAGCTTTATCAAGTTACTTATTTATTGTAATACAACTATTGTTTGTAAAAAGACCACAAAAGAGACACTAACGAACTCCAATGGAGGATTGTCTTTTAAAACACAAGGAAAAGGAAGTGTAAACAGTAATATGAATGTATGCATTGAAAATGATAAATGACATGATCAATTCCTTTATCATGGTATTTTTACAACGCATTATAGCCCGGTTTAGTTATATCATAGTAGCTGTGTATATTTTAACTGCCAGAAATCTCCAAATCATGTGTGAAATATAGCTGAGAGGGTTTTCCGATGAATGTAAATTTATTCTCTTAATTTAATCTAACAGTAGAGTTACAAACTAAACTCATTTAATCAATCAAGTGTTTATCTGCTTGATACCAAGAACTCGTGCAACACCATTCTGATATCCAAGAGGACTAGTAATATGCATTTTTTTAACCTTGCATTTCTCAGGCATCTTTGTTTTACCTTTCTATTCCTTGATAACTTTGCAACCAtttttatttttttttatatatatatttttttttACAAAAAGGCATTTTATTGCACAATGCAGGGACTAAGACAGTCACGACAGTTTTGACTATGAATGGAGATCATAACAATGCTCATTTTAATCATTTTAAAGGTCTTGTGGATTAATTTACAAATAACACAAAATATTGCAT

Protein

Uniprot

Uniprot term	Description
Q19791	A disintegrin and metalloproteinase with thrombospondin motifs gon-1 OS=Caenorhabditis elegans OX=6239 GN=gon-1 PE=1 SV=3
Q9WUQ1	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Rattus norvegicus OX=10116 GN=Adamts1 PE=2 SV=1
P97857	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Mus musculus OX=10090 GN=Adamts1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08685	GON	GON domain	Domain	Interproscan
PF19030	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR012314	Domain	Peptidase M12B, GON-ADAMTSs	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan