Gene detail

Detailed information of ayon_s0419.g2.t1 in Acropora yongei

Genomic Location: sc0000419_pilon:15226...39708
NR annotation: XP_029200590.2, splicing factor 3B subunit 3-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q921M3	Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=1 SV=1
Q5RBI5	Splicing factor 3B subunit 3 OS=Pongo abelii OX=9601 GN=SF3B3 PE=2 SV=1
A0JN52	Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DDB1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03178	CPSF_A	CPSF A subunit region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004871	Domain	Cleavage/polyadenylation specificity factor, A subunit, C-terminal	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050358	Family	RSE1/DDB1/CFT1/CPSF1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10644	DNA REPAIR/RNA PROCESSING CPSF FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005686	Cellular Component	U2 snRNP	Interproscan
GO:0030620	Molecular Function	U2 snRNA binding	Interproscan