Gene detail

Detailed information of ayon_s0765.g1.t1 in Acropora yongei

Genomic Location: sc0000765_pilon:1...7645
NR annotation: XP_029199758.2, polynucleotide 5'-hydroxyl-kinase NOL9-like isoform X3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5SY16	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Homo sapiens OX=9606 GN=NOL9 PE=1 SV=1
E1BPN0	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Bos taurus OX=9913 GN=NOL9 PE=3 SV=1
Q3TZX8	Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Mus musculus OX=10090 GN=Nol9 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16575	CLP1_P	mRNA cleavage and polyadenylation factor CLP1 P-loop	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032319	Domain	Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR045116	Family	Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12755	CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000448	Biological Process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0051731	Molecular Function	polynucleotide 5'-hydroxyl-kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07936	RAN; GTP-binding nuclear protein Ran	-	GTP-binding proteins	ko04031	deepkoala