Detailed information of ayon_s0861.g1.t1 in Acropora yongei

Genomic Location: sc0000861_pilon:1...2454
NR annotation: XP_015747111.1, PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q922K728S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1
P4608728S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NOP2 PE=1 SV=2
P4099125S rRNA (cytosine(2870)-C(5))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOP2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0009383Molecular FunctionrRNA (cytosine-C5-)-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan

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