Detailed information of c0001.g016.t1 in Palythoa umbrosa

Genomic Location: c0001:199303...203611
NR annotation: XP_022779700.1, TNF receptor-associated factor 3-like isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P39429TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2 PE=1 SV=1
Q12933TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN=TRAF2 PE=1 SV=2
P39428TNF receptor-associated factor 1 OS=Mus musculus OX=10090 GN=Traf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012227FamilyTNF receptor-associated factor TRAF, metazoaInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03173TRAF2; TNF receptor-associated factor 2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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