Detailed information of c0001.g056.t1 in Palythoa umbrosa

Genomic Location: c0001:791175...805338
NR annotation: XP_020607236.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P31583Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1
Q9V3I2Ras-related protein Rab5 OS=Drosophila melanogaster OX=7227 GN=Rab5 PE=1 SV=1
P29687Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00531DeathDeath domainDomainInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR020859DomainRoc domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000488DomainDeath domainInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

TOP