Gene detail

Detailed information of c0003.g019.t1 in Palythoa umbrosa

Genomic Location: c0003:234174...235339
NR annotation: XP_031554273.1, homeobox protein Hox-B4-like isoform X1 [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9PWM3	Homeobox protein Hox-C4a OS=Danio rerio OX=7955 GN=hoxc4a PE=2 SV=1
Q1KKU6	Homeobox protein Hox-C4a OS=Takifugu rubripes OX=31033 GN=hoxc4a PE=3 SV=1
P81192	Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09304	HOX_4; homeobox protein HoxA/B/C/D4	-	Transcription factors	ko03000	deepkoala