Detailed information of c0016.g004.t1 in Palythoa umbrosa

Genomic Location: c0016:31889...61443
NR annotation: XP_029198819.2, long-chain-fatty-acid--CoA ligase 1-like isoform X4 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JID6Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus OX=10141 GN=ACSL1 PE=2 SV=1
P33121Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens OX=9606 GN=ACSL1 PE=1 SV=1
O88813Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR045311FamilyLong-chain fatty acid CoA synthetase, eukaryoticInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001676Biological Processlong-chain fatty acid metabolic processInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan

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