Detailed information of c0017.g043.t1 in Palythoa umbrosa

Genomic Location: c0017:454067...465696
NR annotation: XP_031551771.1, protein eyes shut homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20908Collagen alpha-1(V) chain OS=Homo sapiens OX=9606 GN=COL5A1 PE=1 SV=3
O88207Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=2
P12107Collagen alpha-1(XI) chain OS=Homo sapiens OX=9606 GN=COL11A1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

TOP