Gene detail

Detailed information of c0043.g025.t2 in Palythoa umbrosa

Genomic Location: c0043:302857...305411
NR annotation: XP_001633323.2, cyclic AMP-dependent transcription factor ATF-3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O77628	Protein c-Fos OS=Bos taurus OX=9913 GN=FOS PE=2 SV=2
P01100	Protein c-Fos OS=Homo sapiens OX=9606 GN=FOS PE=1 SV=1
P01101	Protein c-Fos OS=Mus musculus OX=10090 GN=Fos PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR000837	Family	AP-1 transcription factor	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23351	FOS TRANSCRIPTION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan