Gene detail

Detailed information of c0048.g029.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: CAH3020221.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P18887	DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
Q9ESZ0	DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2
Q60596	DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|ZnF\|UBZ

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01834	XRCC1_N	XRCC1 N terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006642	Domain	Rad18, zinc finger UBZ4-type	Interproscan
IPR002706	Domain	DNA-repair protein Xrcc1, N-terminal	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11370	DNA-REPAIR PROTEIN XRCC1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0000012	Biological Process	single strand break repair	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10600	UBOX5, UIP5; U-box domain-containing protein 5	-	Ubiquitin system	ko04121	deepkoala