Detailed information of c0050.g001.t1 in Palythoa umbrosa

Genomic Location: c0050:5303...38822
NR annotation: CAH3034540.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9Q414Apolipoprotein B-100 OS=Mus musculus OX=10090 GN=Apob PE=1 SV=1
P04114Apolipoprotein B-100 OS=Homo sapiens OX=9606 GN=APOB PE=1 SV=3
Q28833von Willebrand factor (Fragment) OS=Sus scrofa OX=9823 GN=VWF PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08742C8C8 domainDomainInterproscan
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF06448DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR009454DomainLipid transport, open beta-sheetInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan

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