Gene detail

Detailed information of c0052.g029.t1 in Palythoa umbrosa

Genomic Location: c0052:385250...387487
NR annotation: CAH3161674.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9BRZ2	E3 ubiquitin-protein ligase TRIM56 OS=Homo sapiens OX=9606 GN=TRIM56 PE=1 SV=3
E1BD59	E3 ubiquitin-protein ligase TRIM56 OS=Bos taurus OX=9913 GN=TRIM56 PE=2 SV=1
Q80VI1	E3 ubiquitin-protein ligase TRIM56 OS=Mus musculus OX=10090 GN=Trim56 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR003649	Domain	B-box, C-terminal	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan