Gene detail

Detailed information of c0055.g044.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_031556520.1, vacuolar protein sorting-associated protein 13A-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96RL7	Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2
Q8BX70	Intermembrane lipid transfer protein VPS13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2
Q9BGZ0	Intermembrane lipid transfer protein VPS13A OS=Macaca fascicularis OX=9541 GN=VPS13A PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16909	VPS13_DH-like	Vacuolar-sorting-associated 13 protein, DH-like domain	Family	Interproscan
PF21679	VPS13_C	Intermembrane lipid transfer protein VPS13, C-terminal	Domain	Interproscan
PF09333	ATG2-VPS13_C	ATG2/VPS13, C terminal domain	Domain	Interproscan
PF16910	VPS13_mid_rpt	VPS13, central RBG modules	Repeat	Interproscan
PF06650	VPS13_VAB	Vacuolar-sorting associated protein 13, adaptor binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026847	Family	Vacuolar protein sorting-associated protein 13	Interproscan
IPR031645	Domain	Vacuolar protein sorting-associated protein 13, DH-like domain	Interproscan
IPR049424	Domain	Intermembrane lipid transfer protein VPS13, C-terminal	Interproscan
IPR004170	Domain	WWE domain	Interproscan
IPR015412	Domain	Atg2/VPS13, C-terminal	Interproscan
IPR031642	Domain	VPS13, middle RBG modules	Interproscan
IPR009543	Domain	Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006623	Biological Process	protein targeting to vacuole	Interproscan
GO:0019898	Cellular Component	extrinsic component of membrane	Interproscan
GO:0045053	Biological Process	protein retention in Golgi apparatus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19525	VPS13A_C; vacuolar protein sorting-associated protein 13A/C	-	Membrane trafficking	ko04131	deepkoala