Gene detail

Detailed information of c0057.g023.t1 in Palythoa umbrosa

Genomic Location: c0057:344411...347098
NR annotation: XP_020603193.1, ankyrin repeat and SOCS box protein 13-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF07525	SOCS_box	SOCS box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan
IPR051573	Family	Ankyrin repeat and SOCS box domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24136	SOWAH (DROSOPHILA) HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0045732	Biological Process	positive regulation of protein catabolic process	Interproscan