Gene detail

Detailed information of c0078.g037.t1 in Palythoa umbrosa

Genomic Location: c0078:488022...491528
NR annotation: XP_031564697.1, LIM and SH3 domain protein Lasp-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q3B7M5	LIM and SH3 domain protein 1 OS=Bos taurus OX=9913 GN=LASP1 PE=2 SV=1
Q99MZ8	LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1
Q5R5W0	LIM and SH3 domain protein 1 OS=Pongo abelii OX=9601 GN=LASP1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan
PF00880	Nebulin	Nebulin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000900	Repeat	Nebulin repeat	Interproscan
IPR051759	Family	LIM and SH3 domain-containing protein	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46218	LASP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005925	Cellular Component	focal adhesion	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24420	LASP1; LIM and SH3 domain protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala