Gene detail

Detailed information of c0082.g023.t1 in Palythoa umbrosa

Genomic Location: c0082:360330...361247
NR annotation: NP_001117778.1, polyubiquitin [Oncorhynchus mykiss]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P0CG53	Polyubiquitin-B OS=Bos taurus OX=9913 GN=UBB PE=1 SV=1
P0CG62	Polyubiquitin-B OS=Gallus gallus OX=9031 GN=UBB PE=2 SV=1
P0CG49	Polyubiquitin-B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR019954	Conserved_site	Ubiquitin conserved site	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR050158	Family	Ubiquitin and ubiquitin-like	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10666	UBIQUITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019941	Biological Process	modification-dependent protein catabolic process	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08770	UBC; ubiquitin C	-	Ubiquitin system	ko04121	deepkoala