Genomic Location: :...
NR annotation: XP_015772731.1, PREDICTED: papilin-like isoform X1 [Acropora digitifera]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| P19477 | Fibrinogen-like protein A OS=Apostichopus parvimensis OX=1902835 PE=2 SV=1 |
| D8VNS7 | Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1 |
| Q29041 | Ficolin-2 OS=Sus scrofa OX=9823 GN=FCN2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF00147 | Fibrinogen_C | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | Interproscan |
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR020837 | Conserved_site | Fibrinogen, conserved site | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR050373 | Family | Fibrinogen C-terminal domain-containing protein | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR014716 | Homologous_superfamily | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19143 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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