Gene detail

Detailed information of c0089.g031.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_020611493.1, uncharacterized protein LOC110049928 isoform X2 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P20908	Collagen alpha-1(V) chain OS=Homo sapiens OX=9606 GN=COL5A1 PE=1 SV=3
O88207	Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=2
P12107	Collagen alpha-1(XI) chain OS=Homo sapiens OX=9606 GN=COL11A1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050969	Family	Developmental Signaling Modulators	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR008993	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR048287	Domain	Thrombospondin-like, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14949	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan