Detailed information of c0102.g034.t1 in Palythoa umbrosa

Genomic Location: c0102:443542...444601
NR annotation: XP_050733976.1, high mobility group protein DSP1-like [Eriocheir sinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24537High mobility group protein DSP1 OS=Drosophila melanogaster OX=7227 GN=Dsp1 PE=2 SV=1
Q9YH06High mobility group protein B1 OS=Gallus gallus OX=9031 GN=HMGB1 PE=1 SV=1
P12682High mobility group protein B1 OS=Sus scrofa OX=9823 GN=HMGB1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF09011HMG_box_2HMG-box domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10802HMGB1; high mobility group protein B1-Exosomeko04147deepkoala

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