Detailed information of c0102.g039.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: VDI50185.1, solute carrier family 6 (neurotransmitter transporter, amino acid) member 5/7/9/14, partial [Mytilus galloprovincialis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P31646Sodium- and chloride-dependent GABA transporter 2 OS=Rattus norvegicus OX=10116 GN=Slc6a13 PE=1 SV=1
Q2PG55Sodium- and chloride-dependent GABA transporter 2 OS=Macaca fascicularis OX=9541 GN=SLC6A13 PE=2 SV=1
P30531Sodium- and chloride-dependent GABA transporter 1 OS=Homo sapiens OX=9606 GN=SLC6A1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan

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