Gene detail

Detailed information of c0117.g030.t1 in Palythoa umbrosa

Genomic Location: c0117:390457...411931
NR annotation: KAJ7330775.1, ribosomal protein S6 kinase-like 1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0117.g030.t1

ATGGCCGATTGCCAGTTCGATGAAGACAAATGGATACGAATCTTCAATGTTTCGGATCCTAGAAAGGCAGTTGCAGGCCATACTGTGTATCGTGTGTCGTCAAAGGTGTTTCCAAAGGATTACCCAGAAGCATGTACTGAGATTGTTGTGTGGCGAAGATTTAGTGACTTCAAAAGGCTGCACAAAAAGCTTGTGAAAATATATAACCATAAGTACAAAGATGATAACTTTCCTGAACTTCCAAAGGCCAAATATTTTGGGAGGTTTGAAGAAGGAGTGATAGAGGAAAGAAGACAAAGCCTTTTAGAATTGTTGAATTTTGCTGGCAGCATTCCATCATTATTTACAAGTCAACCATTTGTCCAGTTCTTTGAGGATGGAATTCCTTCCAGTCCATCAGGGGCTATACTGTCCTCTCGGCAGTCCAGTGTCGTAAGTGATGAAGTTGACATTGGTATTGTGGTAGAAGATGCTGAACTGGCTGATGACAAAACAACCTATCAAAAGGGATCAAAAGAACATGGCAGTAATATTACTCCGTCCAAGACTACAAATGACGTGGAAGACAGTTTAGGTGGTATATGGCTTTGCAAGCAACCATCAGAGATAGGCCTCGACAAACTTGCTTCAGATGAAGAAGACACTGAAAGTTGCAGAGGAGACAATGCTGAACCTAAGGCAGACCCAAAGCAATGTGTGTCTCACATACCTCATATTCCTGAAAATAATGCTGACCAGCCATCTGGTATGGCTCCAAATGAGACAAAAGGACAAGTTGCAAAAGTTTCACAAGACTCGGAATTGAAAATTAGCTCAAAAATATATACTGACAATGATGATGTTTTTGCGACAGACTCGTTGGATGAGTTTGTGGTTGATACAGAAGATTCAGAGAAAGACACACCAGAACTTCCTCCAGATCCTCCACACTGGCTAACACGAGCAATTTCAATCTGTAGTGAAGGAGAGGATCTTGAAGTTTTAGCATCAAAGGCAGATGCAGAGGACTCTTGTAATGATTTAGGTTTTCCCAGAGCGTTTTCAGATCAAGAAGAGAGAGAGTTACAAGTAATTAAAACTTCTAAACCGAACAATTCAGGTGGTGCTTCTTATGGTGAAAGCAAATCTTCACCCAGTGATACTGCTAGTCCCAGTGACTCTTCATCCTCTCGACCTCATGAAAAGAAAAAGGAACAAACTTTTAACAGCAGCCAGAAGTTTTCCACAAATAAGGCAAATGAAACAGATTTAGCAGCGAATGTCGACAATGAAGAACAAACTTCTAAAATTCCCAAATATGATCGCCAATCCTTTGAAAATGATGGACGAAATTTGGAAGCAGGAAAAGCTGATGATAAAGAAAATCAGCAGGACCATCTCTCTTCTTTTAGTAGCAATATTTGTAATACGTCATCCCAGCATTTAACAGTTGTTTCTAGCAGTGAGACAAGGTTGAAACCAGCAGCCCCTCAGAAGAAACTCGTCCCAGATCTTATCAATATTGCTCCTGTTGAAAGTGATTATCTGGTGACAGCAGCACGAGCAATCCACAAAGCTCTGGACTGTGAGGTGAATGGAATGTATGAAGATGCATTTAACCTTTACAAGAAATGCGTGGGACTTCTCCTAAACGGCGTTCAAGGTGAAAAAGATGCCAAAAGGCGAGATGCAGTTAGGAGAAAAACTGCTCAATATCTGTTGAAAGCTGAAGCAATTTATAATGTACATCTTGCAGACAGGGACATCTGTGATAGCACATCCGAAGTTGGTGAAGCACaagaacaagaacCTGTTATACAGTCAGAAAACCGATTCAAGGATTTATTTTTACATGATTTGAAAGTGATTGGGATCATAAACAAGGTGATGCTTGTTGAACATGTCCAGAGACAAGAAACGTTTGTCATAAAGGTGTTACACAAAGCTGCTCGGTGTTCACGCCGTGATTCCAAAGGTAGTGACATTCGGCGGAGGAAACACAATAGAAAGATAAACTCACGACACCCATTTATGGTTTGCCTCCACAAGTACTTTGAGACAACCAACGCTATATATCTCTTGCTAGAACATGCCCGTGGAGGGCTCCTCTGGGATTACCTGTCGTCATGCAATCTTATGGGTGAGGGAAAAGAATTGTCGGAATGTAGGAACAGATTTTATGACTTCACTGACCAAAGAGAGGTAGTTCACTGTACAGGTTCAAGCACTAgctcaagctCAGACAGTTCGTCTCTGGATCAACAGGAAAGTGAAATGAACAGTTTATACAAGGACGGAATTGGTCAAGGAATTGGtgatcaaggagttggtgatcaaggaactgatgatcaaggaactggtgatcaaggaattggtggtcaaggaattggtgatcaaggaattagtgatcaaagaattggtgatcaaggaattggtgatcaaggaattAACCCAGGTGAAAGAGTTAGAATTGAAGATAATCGTGAAAAATCAGAGAAGTGTTTAAAATGTACCGGTGTTTGTGATTGTTGTGTGGATTCAGAAATCGGAAATCAAAATCATTTTACTCCGCATTCTTTGTCAACTTTGACAGAAAATAGCGGGTTAGCGAGAAAAGATAAAATATGCAGCTTCGACAAAGAATTTAAAACTTTATCAGACAACAACGTTGTCACAGATGACAGAAAATCGAGGGGATCAAAAACAGTAATCAATTCTGAAGAAGAGATTAAGGCTGAAACACAAActgaaaaacaaacGAGTAAAACCTCGCTTTTTGCAAAACTTGACAAGTACTTCTCAACATCAAACAATAAACTGTCAGAAGACCAGATGCGCTGTTGGATTGCTGAGATCATTTTGGCATTGTCCAACCTACATGCGTGCGGGATTGTCTGCAGAGATTTGCACCCAGGAAATATATTATTAGACGAAGAAGGACACGTTTTGTTGACGTATTTTGGAGCCTGGGACGAAGTTGAGATCCAGCTGAGTGACCAAGCCATCGAAGACTGTTATTGCGCTCCAGAGGTTTTAAAATCGGAGCAAGTCGGAGCTTCAGCAGATTGGTGGAGTGTTGGTGCATTATTATTTGAGATGCTAACAGGAAAGAGTCTTGCTGTCTGCCATCCTTGGAGAGTGAAGTCACATACAGAGTTACAGTTCCCGAACCATGTGTCAACTGAGGCGCGTGGGCTCATTCGAGAGCTTTTGCAAGTCCATCCAACGGAACGATTAGGAGGTGGAACATCTGGCGTTGAAGAAATCAAGTCACACGCATTCTTCCGCGGAATAGACTGGATGGCTGTAGCTTCCAAAGCATCAAGATAG

Transcript

c0117.g030.t1

Protein

Uniprot

Uniprot term	Description
Q9Y6S9	Ribosomal protein S6 kinase-like 1 OS=Homo sapiens OX=9606 GN=RPS6KL1 PE=1 SV=1
Q5RA67	Ribosomal protein S6 kinase-like 1 OS=Pongo abelii OX=9601 GN=RPS6KL1 PE=2 SV=1
Q96S38	Ribosomal protein S6 kinase delta-1 OS=Homo sapiens OX=9606 GN=RPS6KC1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04212	MIT	MIT (microtubule interacting and transport) domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR007330	Domain	MIT domain	Interproscan
IPR051866	Family	Intracellular Signaling and Trafficking Protein	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036181	Homologous_superfamily	MIT domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15508	RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20839	RSKL; ribosomal protein S6 kinase-like	-	Protein kinases	ko01001	deepkoala