Gene detail

Detailed information of c0120.g005.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_032239149.1, SMC5-SMC6 complex localization factor protein 1 isoform X1 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A6QR20	SMC5-SMC6 complex localization factor protein 1 OS=Bos taurus OX=9913 GN=SLF1 PE=2 SV=2
Q9BQI6	SMC5-SMC6 complex localization factor protein 1 OS=Homo sapiens OX=9606 GN=SLF1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00533	BRCT	BRCA1 C Terminus (BRCT) domain	Family	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001357	Domain	BRCT domain	Interproscan
IPR042479	Family	SMC5-SMC6 complex localization factor protein 1	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR036420	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR049936	Domain	DNA topoisomerase 2-binding protein 1, eighth BRCT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46677	SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan
GO:1990166	Biological Process	protein localization to site of double-strand break	Interproscan
GO:2000781	Biological Process	positive regulation of double-strand break repair	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26126	SLF1; SMC5-SMC6 complex localization factor protein 1	-	DNA repair and recombination proteins	ko03400	deepkoala