Detailed information of c0121.g051.t1 in Palythoa umbrosa

Genomic Location: c0121:236906...238474
NR annotation: XP_015749342.1, PREDICTED: tigger transposable element-derived protein 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IY51Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2
Q8BUZ3Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1
P07199Major centromere autoantigen B OS=Homo sapiens OX=9606 GN=CENPB PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP