Genomic Location: c0131:345745...378345
NR annotation: KAJ7340176.1, hypothetical protein OS493_002905 [Desmophyllum pertusum]
| CDS | |||||
| c0131.g019.t1 | |||||
| Transcript |
| c0131.g019.t1 |
| Protein |
| c0131.g019.t1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| E9PY46 | Intraflagellar transport protein 140 homolog OS=Mus musculus OX=10090 GN=Ift140 PE=1 SV=1 | ||||
| Q96RY7 | Intraflagellar transport protein 140 homolog OS=Homo sapiens OX=9606 GN=IFT140 PE=1 SV=1 | ||||
| A8BAF1 | Intraflagellar transport protein 140 OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6) OX=184922 GN=GL50803_0017251 PE=4 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15722 | IFT140/172-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005930 | Cellular Component | axoneme | Interproscan |
| GO:0030991 | Cellular Component | intraciliary transport particle A | Interproscan |
| GO:0035721 | Biological Process | intraciliary retrograde transport | Interproscan |
| GO:0036064 | Cellular Component | ciliary basal body | Interproscan |
| GO:0042073 | Biological Process | intraciliary transport | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19672 | IFT140; intraflagellar transport protein 140 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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