Gene detail

Detailed information of c0141.g017.t1 in Palythoa umbrosa

Genomic Location: c0141:345209...355628
NR annotation: XP_020624887.1, HMG box-containing protein 1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q2KJ34	HMG box-containing protein 1 OS=Bos taurus OX=9913 GN=HBP1 PE=2 SV=1
O60381	HMG box-containing protein 1 OS=Homo sapiens OX=9606 GN=HBP1 PE=1 SV=2
Q5R7I3	HMG box-containing protein 1 OS=Pongo abelii OX=9601 GN=HBP1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR039655	Family	HMG box-containing protein 1	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15499	HMG BOX-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21644	HBP1; HMG box transcription factor 1	-	Transcription factors	ko03000	deepkoala