Gene detail

Detailed information of c0167.g012.t1 in Palythoa umbrosa

Genomic Location: c0167:172410...187650
NR annotation: XP_044176060.1, fibroblast growth factor receptor 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0167.g012.t1

ATGGAATTGAAAACAAGATCTCGCGGCAGCGTTCTTATAACTTTCAACGACACTCGCCTTCCTCTGTGTGCTGATAACTGGGAAAAGAAAACTGCTAAAGTTGCTTGTAAGAATGAAGGATTTCCTGATGGAAAACTTGGGAGACCTACTGAGACTACCCTCTACCAGTCTGTGTACAAACAGTTCTGGAAAGTAGAATTCAACTGCACGGGCAAGGAAGAGTTTATCAGTGATTGCAGTTTAAAAGCCATTAACATCAGCAGTCAGTGCAAAGGAAATCGCCTTGCTACAGTTTCATGTAAAGTTAACATTCGAACAGAGGGTGGAACGAGCGGCCCTTCTTCTGGTCGGGTTGAAGTGCTCTTTATGGGTAGATGGGGAACAGTATGTAGAGACGGTTGGGACATCGCGGCCGCGGCAGTTTTCTGCAAACAGATGGGTTACGGGGGCGCTGCAGCCGAGTTTGATGTTATCAGCGTTCAGTCCATGGACAAAAAAACAGCCCTGTTAGGGAATATACAGTGTTATGGAAATGAGACATCGTTGTTGGAATGTTCTTTTGTAACGGTTCCTCGTCTTCGATGCAAGTCCACAATCCCTGCCAGTTTAGTTTGTGGTCCCGAAAATATTAAAGTGAAATCCCACTCGGCCAGCATCGATGATGCCTCGCTAACTCTCAAATGTGACACATCCGGACCTCAGTCAAAAGGCTGGTACATTGGAAACTCTAAGATAAACAAAACCGCAAGAATCGATATCACTATCAAAAGCTTAACAATTAAAAACGTCCAACCGAGTGACGGAAAAGTTTACACCTGCAGGGGAAAGGAATATTTAATGTTTAGAGTGTATGTTCTTGCTAACGCGGTTGAGACGAAAACAAAACAGGTTTTGAAAGCAAAAACGGAGGGAGAAATTATTTGCAAAGCTGACGGTGCTCCGAAACCTACACTTCAATGGAGCTATGACATAAAAGCGATAGAATATGGTGAACGCCCGTATGATGACGGAAATGGCGTTTTGACATTCAGTGAAGTTGGTCCACAGCATAATGGTTTTTACAACTGCACTGTGTCACAAAGTATTGATAGCGTAACAAGAAGCGTTATTAAGCCCGTCGAAGTTGTTGTTTATGGATCATTCAATTTTACCCAAAGGCCACCGATCAAGCACGAAGTACTTCGCGGTGGGGATTTGATTATCAATTGCAGTGCTAGTGGAATACCTACCCCTCGTCTCTTATGGAAGCGTAACGAAAAAATATTGAGTCACGGGTCCTCTACGGTAGAACTTAAACTTTACAATATTCAAGAAAATGGAATAAAATATACGTGTGAAGCTGAAAGTGGTGAAAAAACAATCAGAACTTCGACAACAGTTGAAACCCTATTTCCACCGTCGATAACAAGCAATTTCAATGATGCATCCCAGGAAGTAGGAAAATCATTTGAGGAAACCTGCACAGCCATTGGGAATCCTTTACCATCCGTTGTCTGGACCAAGGATGGTTCATCATCCATTCCTGCGGGTTACTTAATTGATAACAAAACACTAATGATTGAGAAGTTGAAACCTCACGACTCTGGTGTATATATTTGCACAGCTACAAACATTGTGAATTCTACGCGGGCTTCTCTTCAGTTAACAGTTTTGGAACAGAAAGGAAAATCCTCGAATGACGAGTTTAAATGGTACGCCATTGGCGGTTCAGCagtggttgttgtggtgataatcttcttTGGTTTGGGAATATTTTACCTTAGAAGGCGAGCAGCACAAGGTGAAGATACTACAACGGATAAAATCCAAAGAGACAAGTGGGAATTTCCCCGTAGTCAGCTCTATCTGGTGGAAACGATTGGAAAAGGAGCCTTTGGGGAGGTGTGGAAGGCAACTGCCAAAGGACTCTTAAAGGAAAACGAGGAGACAATCGTGGCTGTAAAGCAAGCAAAGAACGCTGATTTTGTTGGTCATGAAGCCTTGGAAAAGGAGATAAAACAAGGCAAAGCTTTGGGTACTGATAGACATCCTAACGTGTGTAATTTTCTAGGCTGCATTACTGTCTCAGAGCCAATGACAGTTATCacagagttcgcagaatttggagACCTCTTGGACTTTCTGAGGAAATGTAAGGGAGAACACGAAAAGGACTGGGACGGAGATGAGGAACCTTTAAAAGTACTGGGATCGTACGATCTTGTAATCATCTGCATCCAGATAGCCTCGGGGATGGACTTCCTTCATTCCAAAGGGATAAtccatcgcgatctggctgcaaggaatgttctcgttgctgaaggacaccaatgcaaaatcaccgactttgggttggctaTTGAAAGAGGCCATTATGGATATGCTTCAGAAGCAAAGAAAggccaacttcccatcaaatggtcggcaccagagcttctctttgaaaccgagtacagagtaactgctaagattgacgtATGGTCTTATGGAATTCTGATGTACGAGATTGCTACAATCGgtggaacaccctatccaggatggtcaacctaccaagttcTGGTTGAGCTACAGCAGAATAACTATCGGATGGGAAAGCCTGAGAATGCGAGCGACTTCATTTCTGTTTTACAGGAATACCTCGAAATCCAAGGTGTTGATGTGGAGATGTCTGAGCCTCATACTTACCAGAATGTCAATGACGGATGGGACACGACACACCCACCCGGAGAGATCATCGGCGGGAATCTGGTAACTCCTGAGAAGTCCGGGAAATTGAAAGAAAGTAACAGGGTCGGTCACTCTAAAAAAGACACTCACGAAAGTACAGACTGCTCAGAGTTTAAGTCAATTGTAACCATAGCAACGGACCCAGAATCCTTTGAAAGAGAAAGTCCACAAGAACCAGTAGGAATGTCTATTTTAGTTCCATCCAAAAAAGACAACAGAAAAGTTTCTTCAAACGAGACCCGAGTCTGA

Transcript

c0167.g012.t1

Protein

Uniprot

Uniprot term	Description
P22182	Fibroblast growth factor receptor 1 OS=Xenopus laevis OX=8355 GN=fgfr1 PE=1 SV=1
Q91048	Inactive tyrosine-protein kinase 7 OS=Gallus gallus OX=9031 GN=PTK7 PE=2 SV=1
Q8AXB3	Vascular endothelial growth factor receptor kdr-like OS=Danio rerio OX=7955 GN=kdrl PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036772	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR001190	Domain	SRCR domain	Interproscan
IPR017448	Domain	SRCR-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan