Gene detail

Detailed information of c0267.g008.t1 in Palythoa umbrosa

Genomic Location: c0267:115446...119025
NR annotation: CAB3999341.1, uncharacterized protein LOC110234952 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0267.g008.t1

ATGGCGGAGCAAGTCTCAAAATCAAAGCTGCACGGAGGTCAGTCCTGTGTTGCTGGTGCACCAAATAATAAAAGCTGCACAAACAATCAACACACAGAGGGAATATCGCTTCACCGATTTCCAAAGGATCCAACAGTAAAGAAACAGTGGGTCGATTTCGTCCGTCGACATAGAAAAGAATGGCAGCCCGAAAAATATTCTGTTCTTTGCTCTTCCCATTTCGAGGACTCTTGTTACACGAAAAACCGGCAGATTGCAGCTTCTCTTGGTATAAAAAGCATCCTCCATAAAAATGCCGTCCCTACTATTGACGCTGCCGGAACACCAGAAGAACCTGAAATTCCATCAGATCGCGCACGTAGACAAATTCGCCGTAGCGTATTGGCGGAAGAGGCAGAAAAAAATGAGATTTCAACAGAGCCGACGGCCAGCGAATCAGGCCAATCAGACGAAGCTCCCGCCCAACTACCATGTGACAAATGCACTGAGTTGAGTGAAGAATTGAAGCGTGCTCGGAAGAAGCTCTCCTACCACAGGAAAAAAAAGGAGGAACTTCAAACTCTTCTCAACGAAGCAAATGGAGCACTCAACAATCTCTTATGTACACAAGCCGCTGGGGCTGCTAATACcgccagtaaagctgatgatgatggtgatgatgatgatgatcgtggcacagagagtgacaatgaggacgaagttgaatctGATGAAGACTGGGCCCCATTGGAGGAAGAAGCGTCCAACTCATCCGCTGGTGAAGAGGACTTCCTGTCGAACACAGTtgttgTTGAGGAGGGTACTATGCCTTTCGATgagcccaagtttgtagtattttactctacattggtgtccctcttcagtctgttctgttttaactgcaaaagcccatcgccaggcgtcaccgttaaaaagtgtggcacaatggcaactgtgacacaatcgtgcgggatgtgcgaagcaaagaaacagttttattggagaagccagccttatatcttagggaggtacccagccggtaatatattgctaagttttgctattataatgtcgggcgtcaacataagcaaagtgctactcatgtttagacatatggggctgtgtgcaatctctgctcgcacgtattttgttcatcagaacaagttcttgtttccagcaattattcaatactgggaaaaatgtaggggcaccatgctgcagaagttgaaaggcgttaaggaagcgctgacctggtgcggggatggccgtttcgactcgatgggtcattgtgccaaatacggcgtttacaccatgttcaacaacaacatttctaaaattgttcacttcgctcttctccagtcaaatcagtctgtcagtagcaatgcgatggaaaaagacggatgtatccggtgcttcgactttatcattcaggctggcttgaaaatccaggtatttataagtgaccggcacaagagtattgcaaaatgggtcagagaatgtcagaaggccacgctgcacctcttcgacatctggcatgtttgcaaaagtcttcatagggatatcctgaaagccagtaaggagaagggatgcgagatcctgaaagactggagcaaggctatcaagaaccacttgtactggtgcgccacctccacgaagcagggcctgggagagctgattgtagcaaagtggacgtcaatcctccgtcacgtggtcaacaagcacgacaatcaccccaacccgctctacaagaaatgtcaccatgaagaGTTGGAGCCACGTGACTGGTTTGACATAAAATCTACGGCCTATACCAAGCTCAGCGCAATTGTCAACAAACCGAGTACcctcaacgatgtgaagcacctgtcctccgaagcccaaacgagcaacttagaaggttaccattccactcttaatcagtggcaccccaaaatgacccatttctcgtggcttgggactttttgcaggcacgccctggcttctctgcacttcaatgagaacttgaagagggaaacgcgcacgaccaaggcaggacagaactacttcaaagtaacctatcccaaattcaagctgggtgaggaagtagtgagagaagttgccgtaccgcctacgtataATTACGTCGAGGAAATAAAAAGTGTGATCCTCAACACATCACTCGAGTCACTCCATGATACGTTCGTCAGCTTCAAAAAAGACGCCCCTAAACCACTCAACACCCAGTTTACTGAAAGATTAGGTCGGGGAGATGCTATCCAACGCCAGACTGCACGGCAGCAACGTTCGGCAGAGTTATTTCCAAGCGTGGAAGACCAAAATCGCCTCAAACGGGCTGTGGAAGAGAAGAACCATGGAAGTGGCACTAAGAGGGTGCGCCGCTGCTGTGGCCGGCCCACAAGAGGACATCCCCGCACCTACTGTCCAAACAGCGTGGACACTGGCAGCGAGGCTGAGGAAGAGATATGA

Transcript

c0267.g008.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR038441	Homologous_superfamily	THAP-type zinc finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23209	THAP9; DNA transposase THAP9	EC:2.7.7.-	Chromosome and associated proteins	ko03036	deepkoala