Detailed information of c0289.g020.t1 in Palythoa umbrosa

Genomic Location: c0289:167527...180815
NR annotation: XP_001631640.3, nonsense-mediated mRNA decay factor SMG8 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0VA04Nonsense-mediated mRNA decay factor SMG8 OS=Xenopus tropicalis OX=8364 GN=smg8 PE=2 SV=1
Q8ND04Nonsense-mediated mRNA decay factor SMG8 OS=Homo sapiens OX=9606 GN=SMG8 PE=1 SV=1
A1A4J7Nonsense-mediated mRNA decay factor SMG8 OS=Bos taurus OX=9913 GN=SMG8 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10220Smg8_Smg9Smg8_Smg9 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019354FamilyNonsense-mediated mRNA decay factor SMG8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13091AMPLIFIED IN BREAST CANCER 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18734SMG8; protein SMG8-Messenger RNA biogenesisko03019deepkoala

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