Detailed information of c0301.g002.t1 in Palythoa umbrosa

Genomic Location: c0301:23807...29459
NR annotation: CAH3182396.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02874Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=Macroh2a1 PE=1 SV=5
Q9QZQ8Core histone macro-H2A.1 OS=Mus musculus OX=10090 GN=Macroh2a1 PE=1 SV=4
O75367Core histone macro-H2A.1 OS=Homo sapiens OX=9606 GN=MACROH2A1 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF01661MacroMacro domainDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR002589DomainMacro domainInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR035796DomainCore histone macro-H2A, macro domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-Exosomeko04147deepkoala

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