Gene detail

Detailed information of c0301.g014.t1 in Palythoa umbrosa

Genomic Location: c0301:154122...166566
NR annotation: XP_048589981.1, adhesion G-protein coupled receptor D1-like isoform X5 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0301.g014.t1

ATGGCATCTAAAGGATCTCGATATAAAATTTTTGCAGTTTACCTATTAATTGGCCTTTCTACGGATGGCGGCTTAGCAGAAGCGTCAAGCAGAAACCATTACTGGCTAAGTAATTCCTTTaaaaaacaAAAACAGGCAGTAGACGAGTGTGAGAATCATGCCGGAGAAAAAACTTATCGACTGATACGAATATCAACAAAAGCTGAGCTTGAAGAAGCCCAAAAATATATTGGAAAACGCGGACAAGGAAACGCCTCCAAAAAAGAATACTGGACAGCACTCAGCTATGAGAGCGGACGCGGAGGATGGAAATGGGACAGCAGAGAACCAGCCTCGACTCCAGACCGTAATTTGACACTGTCAGTTCAGGAAGAAAATAATGTTATAGGACAAATATGTTTTTATTTTAGCAATAATACCAAGTTAAACAAGAAGAGCTGTGAAATCACAAAGCAATTTCTCTGTGAAAAGATGAACAAGGAAGGTGTGACTGAACGAACACCTCCTGTTAGCCGTCCATCAGTCACTCCCGGTCATAACTCATCTAAACAAAATGCAAAGGATATTATGTCAAAGTATTTAACCAACCTTCAAAAGGCTGACGTTAAACAACCAGATTCTATACAGTATGCGCTGAATGAGACCGCTGAGTTCTTTACGAGCCTACGAGAAGAAAATGTCGACTCAGCAGCCATAGATGTGATGTTTGCAACACAAAAGTTTGAAAGCTTTGCAATTCAGTATGCCAAAACACATCTCAGGAATTCAACGAAGCCGATTGTGATGGGTGACAAACAGCTAGTGCTCTCTTTGGAAGCAGTTCAAGCCGACATCGATGACGATATCATATTCCCTCCCAGGAACACTGGAGGCTCCATCAGCCTCGCATCAGAAACATTCATCAAGCTTCCGGCAAAGCTGTTCACAAAAGAACGAATAGTTGTCAATCTCCTGTACCAGGACACGAAGAACTTAGTTTCAACTAAAGTTCACGATGGCAGTGAAGCTGCAGATACAGAAACCACCACTAGACTCAACTCCGCCATTATTGCAAGCACTCTCGATCCTGCTCCAGATCACGTGCTATCGgaagaagaagAAGTTCTCATTACCTTACAACACCTTGCGGAACGAAAACCAGCCGAGAAACCTTTGTGTGTGTTTTGGGAATTTGAAGCAAAAACTGAAAATAACGGCACGTGGTCTACCAGAGGATGCAGGGTGGTGCAGTCTCAGGTGAACAAAACCACGTGTTCCTGTAACCATCTCACTAACTTTGCCGTCCTCATGCAAGTCAGCAAGACGTCAAAGATTCCAGAAGATCATCAACTGGCGCTATCAATCATCACTTACATCGGTTGTGCTTTCTCGCTTGTGGGTGAATCTCTGACAATAATCGCCTACACGTTGTTTTTGAATTTAAAAGCGGAACAATCTCAAATTCGTGTCAATCTGGTGGTGTCCATCGCGGTGGCCCAGATAGTGTTCCTCTCTGGCATAAACGCAACAAAACACGTGGGCGCCTGTATTTTTGTGGCAGTACTGATTCACTACTTTTACCTGGTCGCGTTTTGCTGGATGTTAATTGAAGGGATGTATCTCTACCTGATGGTTGTCAAGGTGTTTAATACTGTTATTAAGATGAGGCGTTACTACCTATTTGCGTGGGGCTTTCCTCTGCTGATGGTGTTGATATCTCTTGTGATCGCTGCCACACTTGAAGAAGGACTTCAAAGCTATCTGCACAATAAACTCTGCTGGGTGTCATTCGAAACCAATCTGGTCTGGACATTTGTGGCTCCGGTTCTCCTTATTTGCTTTCTAAACACCGTGATTCTGGTCAGAGTCCTGAACGAGATAATGAGGTTGCACAGCTGCAAAGGCAGCGACGTGACAACAGTCAAGCAAGGTCTAAAAGCGTGTGCAATGCTGTTTCCATTGCTGGGTCTCACGTGGGTGTTTGGCGTTCTCAGTGTCACGAAAGCTTCTCTTGTGTTCCAGTATATTTTCACCATCTTCAACTCATTCCAGGGTCTTTTTATTTTTGTCTTCCATGTTGCCAGAAACAATGAGATTCGTCAAAACTTCATGAGGAAGAAGGAAATATGGACAGCAACACGAAGCTCAAATTTCGGTGTTACAGCACGCTCGAACCCAGACTACTCCGTGACAAATACGGTCCAGAAGATCGACATGAGGTTTCCTAGTACCGAGAGTATGAACGCCATTAAAAATAACCAAGTGTCTCCGTCCTCTCCTTGA

Transcript

c0301.g014.t1

Protein

Uniprot

Uniprot term	Description
A6QLU6	Adhesion G-protein coupled receptor D1 OS=Bos taurus OX=9913 GN=ADGRD1 PE=2 SV=1
Q9HAR2	Adhesion G protein-coupled receptor L3 OS=Homo sapiens OX=9606 GN=ADGRL3 PE=1 SV=2
Q6QNK2	Adhesion G-protein coupled receptor D1 OS=Homo sapiens OX=9606 GN=ADGRD1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08465	ADGRD1, GPR133; adhesion G-protein coupled receptor D1	-	G protein-coupled receptors	ko04030	deepkoala