Gene detail

Detailed information of c0336.g004.t1 in Palythoa umbrosa

Genomic Location: c0336:45091...52034
NR annotation: XP_020615160.1, paired box protein Pax-3-B-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P09083	Protein gooseberry-neuro OS=Drosophila melanogaster OX=7227 GN=gsb-n PE=1 SV=2
G5ED66	Paired box protein 3 homolog OS=Caenorhabditis elegans OX=6239 GN=pax-3 PE=1 SV=1
Q28DP6	Paired box protein Pax-3 OS=Xenopus tropicalis OX=8364 GN=pax3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00292	PAX	'Paired box' domain	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001523	Domain	Paired domain	Interproscan
IPR043565	Family	PAX family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan