Gene detail

Detailed information of c0343.g010.t1 in Palythoa umbrosa

Genomic Location: c0343:167754...172941
NR annotation: XP_015751291.1, PREDICTED: elongation factor Tu-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A5DN78	Elongation factor Tu, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=TUF1 PE=3 SV=1
A8HTW6	Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=tuf1 PE=3 SV=1
B8ELG5	Elongation factor Tu OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=tuf PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03143	GTP_EFTU_D3	Elongation factor Tu C-terminal domain	Domain	Interproscan
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR033720	Domain	Elongation factor Tu, domain 2	Interproscan
IPR004541	Family	Translation elongation factor EFTu/EF1A, bacterial/organelle	Interproscan
IPR031157	Conserved_site	Tr-type G domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050055	Family	Elongation factor Tu GTPase	Interproscan
IPR004160	Domain	Translation elongation factor EFTu/EF1A, C-terminal	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR041709	Domain	Elongation factor Tu (EF-Tu), GTP-binding domain	Interproscan
IPR009001	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43721	ELONGATION FACTOR TU-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0070125	Biological Process	mitochondrial translational elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02358	tuf, TUFM; elongation factor Tu	-	Exosome	ko04147	deepkoala