Detailed information of c0390.g016.t1 in Palythoa umbrosa

Genomic Location: c0390:173073...178743
NR annotation: PFX23556.1, Serine--tRNA ligase, cytoplasmic [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13642Serine--tRNA ligase, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=SARS1 PE=1 SV=2
Q6P799Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars1 PE=1 SV=3
P49591Serine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=SARS1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01875SARS, serS; seryl-tRNA synthetaseEC:6.1.1.11
Transfer RNA biogenesisko03016deepkoala

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